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The BIOM file output from the DADA2 pipeline and the DECIPHER-aligned FastTree phylogenetic tree were input into QIIME (v1.9.1) and the scripts in the Supplementary Materials (QIIME Scripts compilation) were used to establish the alpha diversity metrics of Chao1 richness estimate, Simpsons evenness measure E, Shannon diversity index H, Simpsons diversity index, and Faiths phylogenetic diversity metric (whole tree) as well as the beta diversity measures of unweighted and weighted UniFrac analyses (the latter of which factors in ASV abundance 37 ) and BrayCurtis dissimilarity analysis

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Notably, when a higher cutoff value for elevated serum folate was used in this study (60 nmol/L), the OR associated with high folatelow vitamin B-12 increased in magnitude [2.46 (0.90, 6.71)], although it did not reach statistical significance likely because the sample size of participants with cognitive impairment was only n = 7 (23)

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